03 · Publications

Publications

20 of 20 publications

  1. 2026
    Immune checkpoint inhibitor-induced myocarditis is dependent on CD8 T cell-derived TNF and TNFR2 signaling
    Warrick KA, Johansen AKZ, Jiao M, … Hagan T, Molkentin JD, Pasare C
    Journal of Experimental Medicine223(4)
  2. 2026
    A comparative multiomic atlas of human immunity to multiple COVID-19 vaccines
    Arunachalam PS, Hu M, Fang Z, Oliveira APBN, … Kwatra G, Hagan T, Khurana S, Nunes MC, Madhi SA, Pulendran B
    npj Vaccines2026
  3. 2026
    The Immune Signatures Data Resource 2.0: an expanded compendium of systems vaccinology datasets
    Xing J, Gabernet G, Melillo A, … Hagan T, Altman M, Suárez-Fariñas M, Kleinstein S
    Journal of Immunology215(Suppl 1):vkag141.1277
  4. 2025
    VaxGO: an interactive web tool for systems vaccinology data analysis
    Prates-Syed WA, Lima AA, Cortes N, … Hagan T, Krieger JE, Cabral-Miranda G
    Bioinformatics Advances5(1):vbaf101
  5. 2025
    Antibiotic-induced gut microbiome perturbation alters the immune responses to the rabies vaccine
    Feng Y, De Jong SE, Oliveira APBN, … Hagan T, Rouphael N, Pulendran B
    Cell Host & Microbe33(5):705–718.e5Featured
  6. 2025
    Altered baseline immunological state and impaired immune response to SARS-CoV-2 mRNA vaccination in lung transplant recipients
    Hu M, Oliveira APBN, Fang Z, … Hagan T, Dhillon G, Nicolls MR, Pulendran B
    Cell Reports Medicine6(4):102050
  7. 2025
    System vaccinology analysis of predictors and mechanisms of antibody response durability to multiple vaccines in humans
    Cortese M, Hagan T, Rouphael N, … Golding H, Pulendran B
    Nature Immunology26(1):116–130Featured
  8. 2024
    Alloreactive memory CD4 T cells promote transplant rejection by engaging DCs to induce innate inflammation and CD8 T cell priming
    Saha I, Chawla AS, Oliveira APBN, … Hagan T, Katz JD, Pasare C
    PNAS121(34):e2401658121
  9. 2023
    Multi-omics analysis of mucosal and systemic immunity to SARS-CoV-2 after birth
    Wimmers F, Burrell AR, Feng Y, … Hagan T, … Staat MA, Pulendran B
    Cell186(21):4632–4651.e23
  10. 2023
    Addendum: Systems vaccinology of the BNT162b2 mRNA vaccine in humans
    Arunachalam PS, Scott MKD, Hagan T, … Nadeau KC, Pulendran B
    Nature618(7964):E18
  11. 2023
    Systems biological assessment of the temporal dynamics of immunity to a viral infection in the first weeks and months of life
    Wimmers F, Burrell AR, Feng Y, … Hagan T, … Staat MA, Pulendran B
    medRxiv : the Preprint Server for Health Sciences:2023.01.28.23285133
  12. 2023
    Ablation of Adar1 in myeloid cells imprints a global antiviral state in the lung and heightens early immunity against SARS-CoV-2
    Adamska JZ, Verma R, Gupta S, Hagan T, … Li JB, Pulendran B
    Cell Reports42(1):112038
  13. 2023
    SREBP signaling is essential for effective B cell responses
    Luo W, Adamska JZ, Li C, Verma R, Liu Q, Hagan T, … Osborne TF, Pulendran B
    Nature Immunology24(2):337–348
  14. 2022
    Pan-vaccine analysis reveals innate immune endotypes predictive of antibody responses to vaccination
    Fourati S, Tomalin LE, Mulè MP, … Hagan T, … Kleinstein SH, Sékaly R-P
    Nature Immunology23(12):1777–1787
  15. 2022
    Transcriptional atlas of the human immune response to 13 vaccines reveals a common predictor of vaccine-induced antibody responses
    Hagan T, Gerritsen B, Tomalin LE, … Kleinstein SH, Pulendran B
    Nature Immunology23(12):1788–1798Featured
  16. 2022
    The Immune Signatures data resource, a compendium of systems vaccinology datasets
    Diray-Arce J, Miller HER, Henrich E, … Hagan T, … Kleinstein SH, Suárez-Fariñas M
    Scientific Data9(1):635
  17. 2022
    Candida albicans oscillating UME6 expression during intestinal colonization primes systemic Th17 protective immunity
    Shao T-Y, Kakade P, Witchley JN, … Hagan T, … Bennett RJ, Way SS
    Cell Reports39(7):110837
  18. 2021
    Systems vaccinology of the BNT162b2 mRNA vaccine in humans
    Arunachalam PS, Scott MKD, Hagan T, … Nadeau KC, Pulendran B
    Nature596(7872):410–416Featured
  19. 2021
    Systems biological assessment of human immunity to BNT162b2 mRNA vaccination
    Arunachalam PS, Scott MKD, Hagan T, … Nadeau KC, Pulendran B
    Research Square:rs.3.rs–438662
  20. 2019
    Antibiotics-driven gut microbiome perturbation alters immunity to vaccines in humans
    Hagan T, Cortese M, Rouphael N, … Golding H, Pulendran B
    Cell178(6):1313–1328.e13Featured